Deliverable D2.4 – Reference Beacon Implementation for EOSC4Cancer
EOSC4Cancer’s Deliverable 2.4 explores the key functionalities of Beacon, a genomic discovery tool that allows the aggregation of worldwide genomics datasets through a shared query protocol, applied to the cancer field with examples adapted to colon cancer use cases. The document’s principal authors are Jordi Rambla and Teresa García Lezana of the Centre for Genomic Regulation […]
Deliverable D2.1 – SOPs for Minimal Clinical, Image, and Omics Data Exchange
EOSC4Cancer’s Deliverable 2.1 gives an overview of the Standard Operating Procedures (SOPs) for the key datasets in EOSC4Cancer, and describes what steps would be appropriate to improve these SOPs. This deliverable is authored by Work Package 2 partners EMBL, Lygature, Barcelona Supercomputing Center, and Erasmus MC. They are collaborating towards developing data harmonization efforts to […]
Deliverable D2.3 – Survey-based Report Determining Annotation and Harmonization Needs
EOSC4Cancer’s Deliverable 2.3 highlights the importance of common data standards, interoperability, and addresses challenges in data sharing and standardization in cancer research. This deliverable, curated by lead authors Palacký University in Olomouc and supported by Barcelona Supercomputing Center, aims to provide an in-depth exploration of the need for data harmonization in cancer research. The survey […]